PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU27132.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

WOX

Protein Properties

Length: 322aa MW: 36527.8 Da PI: 6.7953

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU27132.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	62.7	5.4e-20	45	106	2	57
T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+t+t++q+++L++l+++ r p+ae+++++++kl +++ ++V++WFqN++a+e++ PHU27132.1 45 STRWTPTSDQIRILKDLYYNngVRSPTAEQIQRISAKLrqygKIEGKNVFYWFQNHKARERQ 106 58***************8678***********************************97 PP
2	Wus_type_Homeobox	113.7	9.1e-37	44	108	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++tRWtPt++Qi+iL++ly+ +G+r+P++e+iqri+a+L++yGkie+kNVfyWFQN+kaRerqk+ PHU27132.1 44 SSTRWTPTSDQIRILKDLYYnNGVRSPTAEQIQRISAKLRQYGKIEGKNVFYWFQNHKARERQKK 108 789*************9779***************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 322 aa Download sequence
MEHQHQHQQQ NQQHYLHQQH IEDGVGSKNN NNSSGSNSFM CRQSSTRWTP TSDQIRILKD 60 LYYNNGVRSP TAEQIQRISA KLRQYGKIEG KNVFYWFQNH KARERQKKRL IAAASVNDNN 120 ININNTNIPG PMQMIPHLWR SVDEHKYNNT TNPGVHCPSA SSHGVLTVGQ TGNYGYGTLA 180 MEKSFRDCSI SPPGGSSNGS SMNHHQNFTW VGVDPYMTCP TTYPFLEKSS INKHYEEETL 240 EEEEELQEEE NYHPGLETLP LXPMHEENMI SSLCNSSIKH HESSGGGGGW YHHTNSDGYH 300 NNNLAALELS LNSFIGRSPN FP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17950.1	2e-38	WOX family protein