PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU27351.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 251aa    MW: 27920.1 Da    PI: 5.0726
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU27351.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.22e-18119168356
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkklege 56 
                 ++GVr ++ +g+W+AeIrdp     +  +r++lg+f tae+Aa+a+++ + +++ge
  PHU27351.1 119 FRGVRKRP-WGKWAAEIRDP-----HraQRVWLGTFITAEDAARAYDKKAIEFRGE 168
                 8*******.**********7.....338*************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MNGICQDSPT QDYNYTLPNK LTQNQELHYM VSALRHVVSG AGDGLADGEA AHLRHVIYGA  60
GDVLADGEAA HLLQEVQNVS GGSSTSANAM PRRSIVDSNE MELQKGGKKR RRRDTTKEFR  120
GVRKRPWGKW AAEIRDPHRA QRVWLGTFIT AEDAARAYDK KAIEFRGEKA KTNFPISEYT  180
DGVVTEQNKL PMPVVEEKKE LVQVGNVVNG DDEVGGVVVD GESSAIQNVD DFWDTLEEDG  240
LVKWITQDMF F
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1108113KKRRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28370.13e-28ERF family protein