PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU27352.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 200aa    MW: 22542.1 Da    PI: 5.4649
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU27352.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.71.2e-1767116356
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkklege 56 
                 ++GVr+++ +g+W+AeIr p     +  +r +lg+f tae+Aa+a+++ + +++ge
  PHU27352.1  67 FRGVRQRP-WGKWAAEIRNP-----HkaQRLWLGTFATAEDAARAYDKKAVEFRGE 116
                 8*******.**********7.....337************************9997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MDGEAAQLLR EVQNVATSDN SMPRRDIIMD SDSVQPGASS YHIGSSLNVE LQQGKKRRRR  60
RNTKKEFRGV RQRPWGKWAA EIRNPHKAQR LWLGTFATAE DAARAYDKKA VEFRGEKAKT  120
NFPIEEYIDG VVSNDQNKTP MVVVEDEEAV QNVMNGAEVA AVGAVNNTKN AVENGMENDK  180
DDFWENLEED GLVKMITRTC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15560KKRRRR
25561KKRRRRR
35661KKRRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33710.15e-27ERF family protein