PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU27416.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

TALE

Protein Properties

Length: 760aa MW: 83015.2 Da PI: 7.4333

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU27416.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.5	2.7e-09	549	586	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps +++ LA+++gL+ +qV++WF N R + PHU27416.1 549 FEHflHPYPSDADKHLLARQTGLSRNQVSNWFINARVR 586 664459******************************88 PP
2	BELL	116.9	9.5e-38	410	481	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +r e+q++k+kLls+l+e ++rY++y+eq+q+v++sF+ v+g g+a pYtslA+ka+SrhFrcLkdaia q+ PHU27416.1 410 DRIEHQRRKVKLLSMLDEAHRRYNHYCEQMQMVVNSFDLVMGFGAAIPYTSLAQKAMSRHFRCLKDAIATQL 481 589******************************************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 760 aa Download sequence
MGIATQLTTS PCVTSHNSKG HQYPVIHQVS ENLNSMSQDY HHHSLFSFPN GFEREQHHHH 60 QQQQQQQQQH MAGQQIRRDK LRVQGFEPQS FEEETSGLPA VYETAGMLSE MFNFPPGAAA 120 PNATELIETQ FNPNFRQPNP NLNPRPQQIH AAAMGNEWFG NRQGMLVGGG ASQQLGYAKN 180 HTPNAAESMQ LFLMNPQPRS PSPSPDPNST SSRLHMLLPN PSSTSTLQGF PNPAEGSFGQ 240 FMTWGSTGAS AATATHHLNN PNEIGGVNVA ESQGLSLSLS SSLQHKAEEL QMSGETGGML 300 FFNQGGPSTS GQFRYKNLNM GGSGISPNIH QVHVGYGSSL GVVNVLRNSR YAKAAQELLE 360 EFCSVGRGKF KKNNNKAAAT NPNSYPSGGN SGGSNNETSS KDVPPLSAAD RIEHQRRKVK 420 LLSMLDEAHR RYNHYCEQMQ MVVNSFDLVM GFGAAIPYTS LAQKAMSRHF RCLKDAIATQ 480 LKHSCELLGE KDAGTSGLTK GETPRLKMLE QSLRQQRAFH QMGMMEQEAW RPQRGLPERS 540 VNILRAWLFE HFLHPYPSDA DKHLLARQTG LSRNQVSNWF INARVRLWKP MVEDMYQQEA 600 KEEEEGVGDE KSQSQNSGNN IITQTPNSMS NSSSTNMTTI TTTTAAAPTT TTALGAAETA 660 TAATAITVTS SKRSLINAPD SDPSLVPINS FSHNQATFPT NIHDPDAAAC RRGGGDGTTT 720 NTHDHMGSTM IRFGTTAGDV SLTLGLRHAG NLPENTHFFG

Sequence ? help Back to Top

Protein Sequence Length: 760 aa Download sequence

MGIATQLTTS PCVTSHNSKG HQYPVIHQVS ENLNSMSQDY HHHSLFSFPN GFEREQHHHH  60
QQQQQQQQQH MAGQQIRRDK LRVQGFEPQS FEEETSGLPA VYETAGMLSE MFNFPPGAAA  120
PNATELIETQ FNPNFRQPNP NLNPRPQQIH AAAMGNEWFG NRQGMLVGGG ASQQLGYAKN  180
HTPNAAESMQ LFLMNPQPRS PSPSPDPNST SSRLHMLLPN PSSTSTLQGF PNPAEGSFGQ  240
FMTWGSTGAS AATATHHLNN PNEIGGVNVA ESQGLSLSLS SSLQHKAEEL QMSGETGGML  300
FFNQGGPSTS GQFRYKNLNM GGSGISPNIH QVHVGYGSSL GVVNVLRNSR YAKAAQELLE  360
EFCSVGRGKF KKNNNKAAAT NPNSYPSGGN SGGSNNETSS KDVPPLSAAD RIEHQRRKVK  420
LLSMLDEAHR RYNHYCEQMQ MVVNSFDLVM GFGAAIPYTS LAQKAMSRHF RCLKDAIATQ  480
LKHSCELLGE KDAGTSGLTK GETPRLKMLE QSLRQQRAFH QMGMMEQEAW RPQRGLPERS  540
VNILRAWLFE HFLHPYPSDA DKHLLARQTG LSRNQVSNWF INARVRLWKP MVEDMYQQEA  600
KEEEEGVGDE KSQSQNSGNN IITQTPNSMS NSSSTNMTTI TTTTAAAPTT TTALGAAETA  660
TAATAITVTS SKRSLINAPD SDPSLVPINS FSHNQATFPT NIHDPDAAAC RRGGGDGTTT  720
NTHDHMGSTM IRFGTTAGDV SLTLGLRHAG NLPENTHFFG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36870.2	1e-137	TALE family protein