PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU27677.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 328aa MW: 37476.2 Da PI: 7.9617

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU27677.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	182.8	8.2e-57	16	141	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lppGfrFhPtdeel+++yL++kv ++++ + ++i evd++kvePwdLp ++k +ekewyfF+ rdkky+tg+r+nrat++gyWkatgkd+e+++ +++l PHU27677.1 16 LPPGFRFHPTDEELITHYLAPKVLDSSFCA-RAIGEVDLNKVEPWDLPWRAKMGEKEWYFFCIRDKKYPTGQRTNRATEAGYWKATGKDREIFK-SKTL 112 79***********************998.89***********888999*************************************.999 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 vg+kktLvfykgrap+gekt+Wvmheyrl PHU27677.1 113 VGMKKTLVFYKGRAPRGEKTNWVMHEYRL 141 ***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 328 aa Download sequence
METMCGFGGQ EEEMELPPGF RFHPTDEELI THYLAPKVLD SSFCARAIGE VDLNKVEPWD 60 LPWRAKMGEK EWYFFCIRDK KYPTGQRTNR ATEAGYWKAT GKDREIFKSK TLVGMKKTLV 120 FYKGRAPRGE KTNWVMHEYR LDGKYSVHNL PKTAKNECVV CRIFKKSSGG KKIPISNLIR 180 SNNMTNNSRS SNLPPLTNMS PYNNNTKITT TARSSGETCN SHVTCFSDSV EDQKPQTHHH 240 HPQPQPLSCS PVSVEFPKDP SNVPNQSMSY IDNFQYADSG LMQDNSIMRL LLDNNYGSES 300 KQNLRGYEDH DFNITSTGPV DIDCLWNY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61430.1	1e-118	NAC family protein