PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU27695.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

MYB

Protein Properties

Length: 304aa MW: 34329.4 Da PI: 7.3365

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU27695.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.8	1.3e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd lv v+++G+g+W+t++ + g++R+ k+c++rw +yl PHU27695.1 14 KGPWTPEEDIMLVSFVQEHGPGNWRTVPTHTGLRRCSKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	48.7	1.7e-15	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T +E++ ++++ ++lG++ W++Ia++++ Rt++++k++w+++l PHU27695.1 67 RGSFTDQEEKMIIQLQALLGNK-WAAIASYLP-ERTDNDIKNYWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 304 aa Download sequence
MGRPPCCDKL GVKKGPWTPE EDIMLVSFVQ EHGPGNWRTV PTHTGLRRCS KSCRLRWTNY 60 LRPGIKRGSF TDQEEKMIIQ LQALLGNKWA AIASYLPERT DNDIKNYWNT HLKKKLKKLE 120 ANDLYSSDGH CLSSIKSASR GQWERTLQAD INTAKQALQN ALSLDKSSPI SEYTIKPINI 180 DCYPSYIKQE AKMSTSTYAS SAENIAKLLK QWTRSDSTNN SEQSKASSST QFSCNTTNNT 240 NAMTEYSSSF ESFEPSNSDQ FSQATTPEAA GKFYGESKRE LDDEVPLSVM LESWLFDEND 300 NLLI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47600.1	1e-101	MYB family protein