PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU27832.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

C2H2

Protein Properties

Length: 225aa MW: 24867.6 Da PI: 6.4979

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU27832.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.3	0.00051	54	76	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C +C++ F ++ L H++ H PHU27832.1 54 FSCLYCSRKFCTSQALGGHQNAH 76 89******************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 225 aa Download sequence
MADPSQQQLV YDFWNQLQSS NSSTTDMVDP SSSIIPIPIP KPKPKVPSAS SRMFSCLYCS 60 RKFCTSQALG GHQNAHKRER AASRRNMFST PTTAAAATDH TNNNMVRLHF LQNNDNMDPS 120 SLIMPQQNII IHDDAAAANT YGNPNYNMMM TGNANYCCFQ QTPPNVNNFN PFSSSSSSHD 180 GFYTPPDLGH HVYFATADGD AAPSTPQDLS TIDERQLNLD LTLRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G14010.1	6e-16	C2H2 family protein