PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU27867.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

C2H2

Protein Properties

Length: 277aa MW: 31601 Da PI: 9.9006

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU27867.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.8	0.00037	117	139	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +C+ C+++++++ +L H + H PHU27867.1 117 SCSVCSRVYPTSRLLSIHVSEaH 139 6*****************99877 PP

Sequence ? help Back to Top
Protein Sequence Length: 277 aa Download sequence
MAMEFETQRE LGFPFWKPIR RRFGPDDPFF AYGNIQRELL AKQIALDLTE EEKQLVQNII 60 TDEEIRFSWL GLNFYGAHLH LHLLALSNLF CPIIGCGARM KSLDDFEDHY ATRHTASCSV 120 CSRVYPTSRL LSIHVSEAHD SFFQAKAARG FPMYECLVEG CGVKLKSYKS RQQHLVDKHK 180 FSASYEFFRK ARPSKKQRQK LQYKQASNKT QTQETSSAMQ VEEERIDNLV SAVSKLTTAD 240 SPSAISFGRS RTRGLSFVPR AVNRQRGSVT STGGTKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G14140.1	1e-108	C2H2 family protein