PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU28067.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family C2H2
Protein Properties Length: 302aa    MW: 32987.3 Da    PI: 4.4056
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU28067.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.35.7e-0594116123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ykC++Cg+ Fs    L  H+r+H
  PHU28067.1  94 YKCSICGEEFSLGQALGGHMRKH 116
                 9*********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MSTPSTTTDM TLTLKRSITE EESVEKFAMA NCVDIMKRNE LSGRHELFKC KTCEKQFDSF  60
QALGGHRTSH KNKKNKLMAT STDIDSLPVK PKKYKCSICG EEFSLGQALG GHMRKHRDEL  120
NQSKQNTKKK LEESESGECA LKEESESGEC ALEESSKSGE CALKEESESG ECALEESSKS  180
GECALKEESE SGECALEESS KSGECALKEE SESGECALEE SSKSGECALK EESESGECAL  240
EESSKSGECA LEEGSKSGEC AEAFHDKEDL GDTKRTLFLD LNYTPYENEL MTGVGPFSFG  300
CN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59820.12e-24C2H2 family protein