PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU28070.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family WRKY
Protein Properties Length: 247aa    MW: 27907.1 Da    PI: 6.1529
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU28070.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY91.65.9e-2958116259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 +D+++WrKYGqK++kgs++prsYYrC+s+ gC ++k+ve+s ++  ++++tY+ eHnh+
  PHU28070.1  58 SDKWAWRKYGQKPIKGSPYPRSYYRCSSSkGCLARKQVEQSCTELGIFIVTYTAEHNHS 116
                 79*************************998****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MSTRYTLDMD LKDVVNVDVL STKDKKVTAA KETKARFEER KNEQKRVVLQ LKADDLSSDK  60
WAWRKYGQKP IKGSPYPRSY YRCSSSKGCL ARKQVEQSCT ELGIFIVTYT AEHNHSQPTR  120
RNSLAGTTKS KFPNSKNSIN SLKKIVKEEK ITSPHCSTSN LGLSPEAARM IDEFPEINQE  180
NNIIIGGDNN YYDEDGMRNI FEGSDENECV SIEEMFDGDF FAGLEDIHDG FNSSFGCNNS  240
AFPFSST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52830.12e-34WRKY family protein