PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU28072.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

WRKY

Protein Properties

Length: 218aa MW: 25126.4 Da PI: 9.1828

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU28072.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	99.2	2.5e-31	139	197	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDg++WrKYGqK vk+s++prsYYrCt+++C+vkk+++r ++d+ +v++tYeg Hnh+ PHU28072.1 139 LDDGFKWRKYGQKAVKNSTHPRSYYRCTHHTCNVKKQIQRHSKDTGIVVTTYEGIHNHP 197 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 218 aa Download sequence
MQHYNSTIMD SGKEPPPPPL LSTDLSPANF FMQQPNDQMP MQNNYHSQAG LDCDNIDWAG 60 LLSAGPSINN ESIATTSNVS INHRNMNTNM MEGGEQHQQQ LLPQQQHEVC RRDKGRIIKK 120 RKYVPPRIAF HTRSTEDILD DGFKWRKYGQ KAVKNSTHPR SYYRCTHHTC NVKKQIQRHS 180 KDTGIVVTTY EGIHNHPCEK LMETLSPILK QLQFLSRF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64000.1	9e-56	WRKY family protein