PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU28106.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Nin-like

Protein Properties

Length: 1006aa MW: 110675 Da PI: 5.6941

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU28106.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	92.4	3.3e-29	606	657	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+isle+l++yF++++kdAAk+Lgvc+T++KriCRq+GI+RWP+Rki+++ PHU28106.1 606 AEKTISLEVLQQYFAGSLKDAAKSLGVCPTTMKRICRQHGISRWPSRKINKV 657 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1006 aa Download sequence
MSEPEEEMNL IFRPPPPPTA QHQPPHNQRE SSASLMMMDL DLDLDSSWSF DQIFAAAAAS 60 NPMFAAAEQP SSPLWAFSDE NEDKPSTTNG NAIAGAGVGS LRLSSYPRFL TTYISEHEAA 120 PETVSVTDDK KRIPPPNMGL NPLDFQDGSC IIKERMTQAL RNFKESTGEC VLAQVWAPVK 180 NGSRYVLTTS GQPFVLDPDC NGLHQYRMVS LMYMFSVDGE TDGVLGLPGR VYRKKLPEWT 240 PNVQYYSSKE FPRLNHALHY NVRGTLALPV FEPSGQSCVG VLELIMTSQK INYAPEVDKV 300 CKALEAVNLK SSEILDYPNH QICNEGRQNA LVEILEILTA VCETYKLPLA QTWVPCRHRS 360 VLADGGGFKK SCSSFDGSCM GQVCMSTTDV AFYVVDAHMW GFREACAEHH LQKGQGVAGR 420 AYASQKSCFC EDIGQFCKTE YPLVHYARLF GLSRCFAICL RSTHTGNDDY ILEFFLPPND 480 GDYTDQFALL NSLLLTMKQH FRSLRVASGE ELEHDWGSVE IIKASAEEKL GSRFESVPTT 540 KSLPQPASVA NGRTRPDLME EQQSPVALNG AKGAEGVNGT AEAHNHTSFS ENKPTGKKSE 600 RKRGKAEKTI SLEVLQQYFA GSLKDAAKSL GVCPTTMKRI CRQHGISRWP SRKINKVNRS 660 LSKLKRVIES VQGADGTFSL TSLAPNSLPV AVGSISWPAG MTDSPCKASE YHEEKNEFSN 720 HGTPASHEEA EPSNQMLGSR IIGNEELSPK QNGFVREGSH RSRTGSFSRE ESTGTPTSHG 780 SCQGSPCAAN ESSPQNELVN SPTQESAMKV EGSLEPARQA TGETNLSTAF LMPGLYIPEH 840 NQQSFKGMLV EDAGSSHDLR NLCPAGDVMF DERVPEYSWT NPPCSNGSAK DQVPLPAEKM 900 PQFSTRPEVT SVTIKATYRE DIIRFRLCLS SGIFKLKEEV AKRLKLEVGT FDIKYLDDDH 960 EWVLIACDAD LQECVDISRS SGSNVVRLLV HDIMPNLGSS CESSGE

Sequence ? help Back to Top

Protein Sequence Length: 1006 aa Download sequence

MSEPEEEMNL IFRPPPPPTA QHQPPHNQRE SSASLMMMDL DLDLDSSWSF DQIFAAAAAS  60
NPMFAAAEQP SSPLWAFSDE NEDKPSTTNG NAIAGAGVGS LRLSSYPRFL TTYISEHEAA  120
PETVSVTDDK KRIPPPNMGL NPLDFQDGSC IIKERMTQAL RNFKESTGEC VLAQVWAPVK  180
NGSRYVLTTS GQPFVLDPDC NGLHQYRMVS LMYMFSVDGE TDGVLGLPGR VYRKKLPEWT  240
PNVQYYSSKE FPRLNHALHY NVRGTLALPV FEPSGQSCVG VLELIMTSQK INYAPEVDKV  300
CKALEAVNLK SSEILDYPNH QICNEGRQNA LVEILEILTA VCETYKLPLA QTWVPCRHRS  360
VLADGGGFKK SCSSFDGSCM GQVCMSTTDV AFYVVDAHMW GFREACAEHH LQKGQGVAGR  420
AYASQKSCFC EDIGQFCKTE YPLVHYARLF GLSRCFAICL RSTHTGNDDY ILEFFLPPND  480
GDYTDQFALL NSLLLTMKQH FRSLRVASGE ELEHDWGSVE IIKASAEEKL GSRFESVPTT  540
KSLPQPASVA NGRTRPDLME EQQSPVALNG AKGAEGVNGT AEAHNHTSFS ENKPTGKKSE  600
RKRGKAEKTI SLEVLQQYFA GSLKDAAKSL GVCPTTMKRI CRQHGISRWP SRKINKVNRS  660
LSKLKRVIES VQGADGTFSL TSLAPNSLPV AVGSISWPAG MTDSPCKASE YHEEKNEFSN  720
HGTPASHEEA EPSNQMLGSR IIGNEELSPK QNGFVREGSH RSRTGSFSRE ESTGTPTSHG  780
SCQGSPCAAN ESSPQNELVN SPTQESAMKV EGSLEPARQA TGETNLSTAF LMPGLYIPEH  840
NQQSFKGMLV EDAGSSHDLR NLCPAGDVMF DERVPEYSWT NPPCSNGSAK DQVPLPAEKM  900
PQFSTRPEVT SVTIKATYRE DIIRFRLCLS SGIFKLKEEV AKRLKLEVGT FDIKYLDDDH  960
EWVLIACDAD LQECVDISRS SGSNVVRLLV HDIMPNLGSS CESSGE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	0.0	Nin-like family protein