PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU28200.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 226aa    MW: 25421.3 Da    PI: 7.1517
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU28200.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP235.52.5e-11119165454
         AP2   4 kGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkle 54 
                  G+r++k +gr++AeI dp     + k+++lg+f+t e+A +a+   + ++e
  PHU28200.1 119 VGIRRRK-SGRYFAEISDPI----QhKKVYLGTFDTIEQASQAYFSKKSEFE 165
                 69**999.7*********82....46******************87776665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MRGKYNYEST SPISKKRVWL DTFGTAEEAS RVDHHSKKLE FDVMLSHSEQ HGRSEVDASI  60
SNADNVGIDR RIDCHEIGTG EEASRVFNSC LMANVHGAES SDECNITRNC DPKDKIRLVG  120
IRRRKSGRYF AEISDPIQHK KVYLGTFDTI EQASQAYFSK KSEFENLRKG NKDDKPKKNC  180
DQIQQPESPS VVETLNTATS CDPKDKISGQ EKLNGPQIGL FPQVVP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1117125RLVGIRRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.12e-14ERF family protein