PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU28295.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 250aa    MW: 28417 Da    PI: 4.8156
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU28295.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.41.3e-135195554
                HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH  5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                + + Er+RR+++N++++ Lr ++P+ +      K++Ka+i + A+eYI++L
  PHU28295.1 51 NIMSERNRRKKLNERLFALRAVVPNiS------KMDKASIIKDAIEYIQDL 95
                5678*********************66......****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MENISEDYNN YWETAMFLPL EEFDSCFDEA ISSYYDSSSP EGAQSSMASK NIMSERNRRK  60
KLNERLFALR AVVPNISKMD KASIIKDAIE YIQDLHEQER RIRAEISVLE SGRSKKNSDV  120
EFDQDGSFDL KPKRSKRLEQ QYDYDSSEST TKSSPSSSPI DVLELRVSSM GEKTMVASLT  180
CSKRRDTMIK VCEVFESLNI KIISANITAF SGRLLKIAFI EVDKEESDIL KLRIESAIAS  240
LNDPHSPMSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.12e-82bHLH family protein