PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU28352.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 190aa    MW: 20406.8 Da    PI: 5.2723
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU28352.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.23.2e-162471355
         AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                ++G+r ++ +g+Wv+eIr+p++   ++r++lg++ t+e+Aa+a++ a+ +l+g
  PHU28352.1 24 FRGIR-CR-SGKWVSEIREPRK---TRRIWLGTYPTPEMAAAAYDVAAMALKG 71
                89**9.55.6*********843...5***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    
MSSTSSGGSG SSPGRPTGGK HAVFRGIRCR SGKWVSEIRE PRKTRRIWLG TYPTPEMAAA  60
AYDVAAMALK GSDAIINFPN NINLYPSLPP SPSAAHIRKA AATAAALMKV ETGEATSGTT  120
QPGTDDQSSE NMHMNIETKD HEYIDEEALF DMPNLLVDMA EAMMVSPPRM NSPRSDDSPG  180
NSDAESLWSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.12e-39ERF family protein