PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU28375.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family BBR-BPC
Protein Properties Length: 215aa    MW: 23576.1 Da    PI: 10.3633
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU28375.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind190.61.9e-5850215130301
   GAGA_bind 130 eklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnG 228
                 e++ + + + + +++k++  + k+ r+++ k  k +++++ks++skk++ ++++  ++   kk         s D s+lP+P CsCtG++r+CYk G G
  PHU28375.1  50 EQNVNAKFKAKSQKIKKNMPPMKGIRETVSKLLKVERPENKSSASKKTKGEARCG-EATVIKKPKS----VASADFSGLPPPFCSCTGVSRKCYKCG-G 142
                 2223333344555556666666666666666666666666666665555555554.3344444444....3589*********************99.9 PP

   GAGA_bind 229 GWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                 GWqS+CCtt++S yPLP ++ ++g R++grKmS+ga++klL  La+eG dlsnpvDLk+hWAkHG nkf ti+
  PHU28375.1 143 GWQSSCCTTSLSEYPLPWNPSKPGYRLTGRKMSNGAYNKLLFTLATEGCDLSNPVDLKNHWAKHGSNKFTTIK 215
                 ************************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
MASQVNHKEE TFDSHFPWMH QVNFTPATKF GSESKPCAAV PIRSVAPTGE QNVNAKFKAK  60
SQKIKKNMPP MKGIRETVSK LLKVERPENK SSASKKTKGE ARCGEATVIK KPKSVASADF  120
SGLPPPFCSC TGVSRKCYKC GGGWQSSCCT TSLSEYPLPW NPSKPGYRLT GRKMSNGAYN  180
KLLFTLATEG CDLSNPVDLK NHWAKHGSNK FTTIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35550.38e-51BBR-BPC family protein