PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU28385.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 203aa    MW: 23168.6 Da    PI: 5.0753
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU28385.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.41.2e-133377554
                HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH  5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                +   Er+RR+++N++++ Lr ++P+ +      K++Ka+i + A+eYI++L
  PHU28385.1 33 NIVSERNRRRKLNERLFALRAVVPNiS------KMDKASIIKDAIEYIQDL 77
                5567*********************66......****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MFLPSEEFDS CFDEAISSYY DSSSPDGAQS SKNIVSERNR RRKLNERLFA LRAVVPNISK  60
MDKASIIKDA IEYIQDLHEQ ERRIRAEISV LESGRSKKNN DVEFDQDGSF DLKPKRSKRL  120
EQQSKKNNDV EFDQDGSFDL KPKRSKRLEQ QYGYDSSGST TRSSPSSSPI DVLEAEGEER  180
EILKLRIENA IASLNDPHSP MSP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.13e-29bHLH family protein