PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU28441.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

YABBY

Protein Properties

Length: 131aa MW: 14509.4 Da PI: 7.0899

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU28441.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	81.2	3.1e-25	17	105	6	91
YABBY 6 sseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkee...lleelkveeenlksnvekees 91 seq+Cyv+Cn C+t+lavsvP tslfk+vtvrCGhC++ll l +++ +h+++s+ + llee +++ n+ +n+ ++ + PHU28441.1 17 PSEQLCYVHCNNCDTVLAVSVPCTSLFKTVTVRCGHCANLLPGWLLPSTNHHHQLHHFGHSYFSPshnLLEEISNATPNFLMNQGNSAH 105 68****************************************99999998889999999988766334666666666666666555444 PP

Sequence ? help Back to Top
Protein Sequence Length: 131 aa Download sequence
MSSSNSLSLD HLPPPPPSEQ LCYVHCNNCD TVLAVSVPCT SLFKTVTVRC GHCANLLPGW 60 LLPSTNHHHQ LHHFGHSYFS PSHNLLEEIS NATPNFLMNQ GNSAHDFVLP ARPGFDDLPR 120 PPPVINRREK S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00180.1	2e-21	YABBY family protein