PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU28443.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 336aa MW: 38815.4 Da PI: 7.6312

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU28443.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	172.3	1.4e-53	7	136	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeek.ewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 +ppGfrFhPtdeelv++yL+kk+++k+++l +vike+d+yk+ePwdL++ ++ +e+ ewyfFs++dkky+tg+r+nratk+g+Wkatg+dk++++ k PHU28443.1 7 VPPGFRFHPTDEELVDYYLRKKIASKRIDL-DVIKEIDLYKIEPWDLQElcRIGSEDPsEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYR-K 103 69**************************.9***********954455554446**********************************.9 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrle 129 + l+g++ktLvfykgrap+g+k+d +mheyrle PHU28443.1 104 HCLIGMRKTLVFYKGRAPNGQKSDYIMHEYRLE 136 99***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 336 aa Download sequence
MNSFTHVPPG FRFHPTDEEL VDYYLRKKIA SKRIDLDVIK EIDLYKIEPW DLQELCRIGS 60 EDPSEWYFFS HKDKKYPTGT RTNRATKAGF WKATGRDKAI YRKHCLIGMR KTLVFYKGRA 120 PNGQKSDYIM HEYRLETNEN GTQAKGWAVC RVFKKKLATS IRGEGEQYQQ ESLCWYNNEQ 180 LVSNFIPDFD SPRRNNFPNI PYNTTPSYHH QLPYTNMQPH NNDALFLQLP QLESPKIPQS 240 YHGINQINIA QPNSIYNNYD NQAVDQVTDW RVLDKFVASQ LSQQDGTAAA CSSSPASHEQ 300 QMNLLQDDSI NKGTEMASSE IASLSASSSQ LDHLWK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62700.1	1e-123	NAC family protein