PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU28517.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 229aa    MW: 25554.5 Da    PI: 6.7912
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU28517.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.39.2e-1950100256
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                  y+GVr+++ +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++ a+ +++g+
  PHU28517.1  50 LYHGVRRRS-WGKWVSEIREPRK---KSRIWLGTFATPEMAARAHDVAAIAIKGH 100
                 69****887.**********843...6**********************999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MEQHQSPTTF NNNKQTSSSS LTKRPITLTS SKQETNHKKN KKIDGSKHPL YHGVRRRSWG  60
KWVSEIREPR KKSRIWLGTF ATPEMAARAH DVAAIAIKGH VALLNFPELA HQFPKPASKC  120
AKDVQTAAAK AAALDISPRN SMEVPCSPYG ETESIESSLG SSNDDPFLDL PDLLMDLTQK  180
FDEVCHYNSS WDLAGAGSGS NDSCEFWPEE DLYLLDYSHE TALEVPQRQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.19e-36ERF family protein