PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU28543.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 224aa    MW: 25062.7 Da    PI: 5.4268
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU28543.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.59.4e-20125175255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+++AeIrdp +ng  +r++lg++ tae+Aa a+++a+ +++g
  PHU28543.1 125 HYRGVRQRP-WGKFAAEIRDPAKNG--ARVWLGTYETAEDAALAYDKAAFRMRG 175
                 7********.***********9987..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MFGNIDFEND YALLQSIKLQ LLEDWEWENP PATSSENYAS SYGRNNSMES NTNTLSNVFP  60
NEFDYTSDST FVSDFLNDCI GHERQPSSVK SEPEIWNFSE YAALPETRVV VAPPPPPEPV  120
VNARHYRGVR QRPWGKFAAE IRDPAKNGAR VWLGTYETAE DAALAYDKAA FRMRGSRALL  180
NFPLRINSGE PEPVRVGSKK SSTSPECSSS SSSSSGKRRK KIPV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47220.12e-42ERF family protein