PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU28636.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

MYB

Protein Properties

Length: 215aa MW: 24816.4 Da PI: 10.0138

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU28636.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58	2.1e-18	15	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed++l d+++ G +W +I+++ g++R++k+c++rw +yl PHU28636.1 15 KGPWTPDEDKKLMDYITNNGHTNWQLIPKKAGLNRCGKSCRLRWTNYL 62 79********************************************97 PP
2	Myb_DNA-binding	52.7	1e-16	68	113	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ eE+e+++ ++ lG++ W++Ia++++ gRt++++k++++++l PHU28636.1 68 RGAFSFEEEEIIISLHSILGNK-WSRIASHLP-GRTDNEIKNFYNTHL 113 899*****************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 215 aa Download sequence
MGRYPCFKVD EDLKKGPWTP DEDKKLMDYI TNNGHTNWQL IPKKAGLNRC GKSCRLRWTN 60 YLRPDIKRGA FSFEEEEIII SLHSILGNKW SRIASHLPGR TDNEIKNFYN THLRKKLLRL 120 GIDPRTHKPI SDLNFLINLS HQFPSKHNLF INNPLAYALK LQAQVTEIAK LQQLLQDLYA 180 PINTNIPLLP SNFQENNFAT SSSHVITTNV STNTH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G10280.1	2e-66	MYB family protein