PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU28692.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family MYB_related
Protein Properties Length: 240aa    MW: 27618.6 Da    PI: 4.1833
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU28692.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding29.22.1e-097312348
                     -HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqkyl 48
                     +W++I+++++ gRt++++k++w+++l
       PHU28692.1  7 RWSLISEHLP-GRTDNEIKNYWNSHL 31
                     5*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
LKCLFCRWSL ISEHLPGRTD NEIKNYWNSH LSRKVESLRI PSDEKLPQAV VELAKKGKQK  60
QFIKQRCKRK TNASVLNSTS ETAVPITPRL NIEKETPNTI GNGDNNAMEL DRNDHQMLWH  120
DDIVLMDDKD AEIDEDFIFN CLWNDEGENL ELVEKNNNNN NEIFGEDSYG TLNCWDWEYL  180
GEILNNETLA STQEAGQENN GMSSVSIFDM NDNMPNCMNE EATVENIDLM QSDLVNWLLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47460.12e-13MYB family protein