PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU28752.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bZIP

Protein Properties

Length: 394aa MW: 41749.7 Da PI: 6.9256

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU28752.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	64.9	1.5e-20	290	352	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkr+rrkq+NRe+ArrsR+RK+ae++eL++++++L++eN +L+ el++l+ e ++l +++ PHU28752.1 290 ERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEVLKEENASLRAELSRLRSEHDQLAAQN 352 89*******************************************************999887 PP

Sequence ? help Back to Top
Protein Sequence Length: 394 aa Download sequence
MGSSDIDKSS KEAKEAKTPN SQEQASSAAT GTVNPDWSAF QGYSPMPPHG FMASSPQAHP 60 YMWGVQHLMP PYGTPPHPYV AMYPHGGIYA HPSIPPGSYP FSPFAMPSPN GIAEVAVNTS 120 GNAEVDGKSS EGKEKLPIKR SKGSLGSLNM ITGKNNEHVK TSGASANGGY SKSAESRSGE 180 GSSEGSDANS QNESPMKSAG GQDSAEEASQ NGNSAHSSQN GGISAPHSLV NQTMAIMPMS 240 AVGAGGVPGP TTNLNIGMDY WNAAASPIAG GMVTAGSRDI VQSQMWIQDE RELKRQRRKQ 300 SNRESARRSR LRKQAECDEL AQRAEVLKEE NASLRAELSR LRSEHDQLAA QNASLKERLG 360 EVPGRDDPRP SRNDIPLNNG NQHSSQTEST QGGQ

Sequence ? help Back to Top

Protein Sequence Length: 394 aa Download sequence

MGSSDIDKSS KEAKEAKTPN SQEQASSAAT GTVNPDWSAF QGYSPMPPHG FMASSPQAHP  60
YMWGVQHLMP PYGTPPHPYV AMYPHGGIYA HPSIPPGSYP FSPFAMPSPN GIAEVAVNTS  120
GNAEVDGKSS EGKEKLPIKR SKGSLGSLNM ITGKNNEHVK TSGASANGGY SKSAESRSGE  180
GSSEGSDANS QNESPMKSAG GQDSAEEASQ NGNSAHSSQN GGISAPHSLV NQTMAIMPMS  240
AVGAGGVPGP TTNLNIGMDY WNAAASPIAG GMVTAGSRDI VQSQMWIQDE RELKRQRRKQ  300
SNRESARRSR LRKQAECDEL AQRAEVLKEE NASLRAELSR LRSEHDQLAA QNASLKERLG  360
EVPGRDDPRP SRNDIPLNNG NQHSSQTEST QGGQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	307	313	RRSRLRK
2	307	314	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35530.1	1e-150	bZIP family protein