PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU28797.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 529aa MW: 60124.9 Da PI: 4.6415

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU28797.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	55.7	1.7e-17	113	263	2	127
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.......kvka.eek.ew.yfFskrdkkyatgkrknra............. 77 G+rFhPtd+el+ +L + +++k+l+ + i+e d+yk ePw + +++ ++ yf ++ +k++ ++k+k+ PHU28797.1 113 EEGYRFHPTDSELL-AFLLRFIAEKDLRDDGYITEHDVYKQEPWVTYGcgchcggE--DdGDTsSYrYFITPMHKNKIKKKKKS-Lgddkkkdrfcriv 207 67**********.89999**999889********997446654431..12333233477777666555433222.13455555666766 PP NAM 78 .tksgyWkatgkdkevlsk......kgelvglkktLvfykgrapkgektdWvmheyr 127 k g+Wk++ k k+v+ + k+ +g kk+L + ++ + +W+m+ey+ PHU28797.1 208 gEKLGTWKQKDKGKNVIMTsfgnqsKSLIIGRKKSLCYE-TTRCCPDDGKWLMKEYA 263 6679****99998877876544445****97.56666789******7 PP

Sequence ? help Back to Top
Protein Sequence Length: 529 aa Download sequence
MAALAFDGII QIYYVKNQAL VAWRELDHTW RGRFEPSIDQ TQVWKIAWSR EDLRTLGFKP 60 PLLVHGFGSL YYGNFGHLAL RAIWIFILSS NTPSPPLVIK VTLSLALQEI VMEEGYRFHP 120 TDSELLAFLL RFIAEKDLRD DGYITEHDVY KQEPWVTYGC GCHCGGEDDG DTSSYRYFIT 180 PMHKNKIKKK KKSLGDDKKK DRFCRIVGEK LGTWKQKDKG KNVIMTSFGN QSKSLIIGRK 240 KSLCYETTRC CPDDGKWLMK EYAFCEIILN QFSKSKFRDY VICAIKRKSQ KNSSNGTRCS 300 NRTTIMDTEV DSEVNSVEPL MDLKYNALTP IQVDSMLESE VQIQGAASEE NNVVLGITTT 360 TQIQEHNDLE IMDISDQDFE MISPISVAEN LMLEFDEFKA KIQEADGEEN GVWGIQEFEN 420 ASPEINLPNF LDLLSGDADY CSTSNHVEIQ EAHGEENGQL ELCTSPQIQE PVILDFANLN 480 SQLNMPDFFD TCLNTWVSQN SWIYELISPF DFSKQGTAES NASGADSRG

Sequence ? help Back to Top

Protein Sequence Length: 529 aa Download sequence

MAALAFDGII QIYYVKNQAL VAWRELDHTW RGRFEPSIDQ TQVWKIAWSR EDLRTLGFKP  60
PLLVHGFGSL YYGNFGHLAL RAIWIFILSS NTPSPPLVIK VTLSLALQEI VMEEGYRFHP  120
TDSELLAFLL RFIAEKDLRD DGYITEHDVY KQEPWVTYGC GCHCGGEDDG DTSSYRYFIT  180
PMHKNKIKKK KKSLGDDKKK DRFCRIVGEK LGTWKQKDKG KNVIMTSFGN QSKSLIIGRK  240
KSLCYETTRC CPDDGKWLMK EYAFCEIILN QFSKSKFRDY VICAIKRKSQ KNSSNGTRCS  300
NRTTIMDTEV DSEVNSVEPL MDLKYNALTP IQVDSMLESE VQIQGAASEE NNVVLGITTT  360
TQIQEHNDLE IMDISDQDFE MISPISVAEN LMLEFDEFKA KIQEADGEEN GVWGIQEFEN  420
ASPEINLPNF LDLLSGDADY CSTSNHVEIQ EAHGEENGQL ELCTSPQIQE PVILDFANLN  480
SQLNMPDFFD TCLNTWVSQN SWIYELISPF DFSKQGTAES NASGADSRG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	188	200	KKKKKSLGDDKKK
2	188	217	KKKKKSLGDDKKKDRFCRIVGEKLGTWKQK
3	189	218	KKKKKSLGDDKKKDRFCRIVGEKLGTWKQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10480.2	2e-08	NAC family protein