PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU28808.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

G2-like

Protein Properties

Length: 152aa MW: 17177.5 Da PI: 9.9558

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU28808.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106	2.2e-33	23	77	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt +LH+rFv+av++LGG++kAtPk++l+lm++kgLtl+h+kSHLQkYRl PHU28808.1 23 KPRLRWTADLHDRFVDAVTKLGGPDKATPKSVLRLMGLKGLTLYHLKSHLQKYRL 77 79****************************************************8 PP
2	Myb_DNA-binding	69.1	7.4e-22	25	76	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++++vdav++lGg+ t+k++ r mg kg+tl+++ks++qky+ PHU28808.1 25 RLRWTADLHDRFVDAVTKLGGPdkaTPKSVLRLMGlKGLTLYHLKSHLQKYR 76 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 152 aa Download sequence
MDRMYNGGGD GYENGVVMTR DPKPRLRWTA DLHDRFVDAV TKLGGPDKAT PKSVLRLMGL 60 KGLTLYHLKS HLQKYRLGQQ AKKQNAAEQN RENIAAESFG QFSLHSSGPS ITSSSMNGMQ 120 GEAPISEQLW CQFEVQKRLQ EQLEVQQKLQ MR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45580.1	7e-40	G2-like family protein