PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU29198.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family FAR1
Protein Properties Length: 234aa    MW: 27159.9 Da    PI: 9.7546
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU29198.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR173.54.5e-2353140290
        FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                 +YneYA ++GFsvrk++ +k++ +g +t+ +f+C+keg+r+ +k++ +  ++++++trtgC a++ ++ +++g++++t++e++Hn +l+
  PHU29198.1  53 CYNEYAASIGFSVRKEYANKNRVQGYVTSTKFTCYKEGYRNINKQD-SIVKKHKKKTRTGCLAHIIISHQSNGVFHITSFEEKHNYPLV 140
                 7******************************************999.8899999*******************************9996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MMFKSTLQMN VSLNFEKFAL RFMDPISTKP QGECNVSIKL GMEFGSDEHT YECYNEYAAS  60
IGFSVRKEYA NKNRVQGYVT STKFTCYKEG YRNINKQDSI VKKHKKKTRT GCLAHIIISH  120
QSNGVFHITS FEEKHNYPLV DPTLSYLLPS QRKIKVVQAY ELDLLDDSGI RPKVSFEYAA  180
RQAGGQSFLG YTKRDHKNYL RDKRQESLKH GVDRSLVNYF EKRSLEDPAF RFSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-29FAR1 family protein