PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU29263.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family HB-other
Protein Properties Length: 157aa    MW: 18062.8 Da    PI: 11.1051
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU29263.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox26.11.5e-082571345
                --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHH CS
    Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVk 45
                k  ++t+ q+e+Le++++++++ps  +r++L +++    +++ +q+k
  PHU29263.1 25 KYVRYTTVQVEALERFYAECPKPSSLRRQQLIRECpilsNIEPKQIK 71
                56789*******************************99*9**99997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    
MAMVAQQRRE SSSGSITKHL DSSGKYVRYT TVQVEALERF YAECPKPSSL RRQQLIRECP  60
ILSNIEPKQI KRKCFWRPEH EAQIKANFKL KAGRILTGLL SKARGNNKRP RWILPENWQK  120
LVNHWETDSR FKQMSEIGKK ARASLKGGSL HTSGAQS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60690.12e-31HD-ZIP family protein