PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU29393.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 283aa    MW: 32500.8 Da    PI: 5.6527
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU29393.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM48.43.1e-15611711128
         NAM  11 deelvveyLkkkvegkkleleevikevdiykv.ePwdLpkkvkaeekewyfFskrdkkyatgkrknr..atksgyWkatgkdkevlskkgelvglkktL 106
                 d+el++ yL k v g ++++ + i+ vd+y   +P++L ++  + ++  y F+k +kk+++gk+ nr  +  +g Wk   ++k+v++++++++g +kt+
  PHU29393.1   6 DDELLMAYLLKFVCGMPIQC-QQIQIVDLYGNnKPSQLFNT--TITSVNYVFTKLKKKTRNGKNINRgiVGGDGSWKGINNSKPVYNREKSVIGFQKTF 101
                 89******************.77******97648****632..224567******************7445599************************* PP

         NAM 107 vfykgrapkgektdWvmheyrl 128
                  f +g         W m+eyrl
  PHU29393.1 102 RFDEG------IHVWNMKEYRL 117
                 **843......457******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
MGNNFDDELL MAYLLKFVCG MPIQCQQIQI VDLYGNNKPS QLFNTTITSV NYVFTKLKKK  60
TRNGKNINRG IVGGDGSWKG INNSKPVYNR EKSVIGFQKT FRFDEGIHVW NMKEYRLTDE  120
TIAVLRKRCQ ILHEDFVVCR ITYHVPKPKQ LTAKSSAQYQ FQENQELGGS NAAAVVPYDQ  180
FSSIWNGNEY SITQETPYVS PNDDIARYHR ELDAYAASIL ESVSPIDHIA HRELDAYAAT  240
TLEFDMNSLD PYVPQDEDYC SLFCEDFYIA ISVFFPLKLL YLV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G46590.16e-14NAC family protein