PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU29399.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 169aa    MW: 19473.2 Da    PI: 10.188
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU29399.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.81.3e-18102152155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 ++y+GVr++k +grW+AeI+d ++n  ++r++lg+f+taeeA  a+++ + +++g
  PHU29399.1 102 KKYRGVRQRK-WGRWAAEIQD-KIN--NTRHWLGTFDTAEEAVVAYDEEAIEING 152
                 59*******9.**********.345..4********************9999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 169 aa     Download sequence    
MASNDEHHQN VTVEKPSKIE RVEKSTKKAG KSSVVMPRVV RIYMTDNDAT DSSSDEEEML  60
QGEKSQRPKK LWIKEIMIEN GRTRVISKKK SKEKKLLQVN MKKYRGVRQR KWGRWAAEIQ  120
DKINNTRHWL GTFDTAEEAV VAYDEEAIEI NGANALTNIL EPPPKKINP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.15e-23ERF family protein