PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU29550.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 220aa    MW: 25242.7 Da    PI: 10.7176
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU29550.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.34.5e-1978134255
         AP2   2 gykGVrwdkkrgrWvAeIrdpse..ng..krkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+++Ae+rdp+   n+   + r++lg++ t+e+Aa a+++a+ kl+g
  PHU29550.1  78 RYRGVRRRR-WGKFAAEVRDPTRkrNNnnNNNRVWLGTYETPEDAALAYDRAAYKLRG 134
                 59****777.**********65558556555*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MKKKLREAIG SSHKVYCCIY KVEKKASYKK KSFIKEIISP FNNITSAIGY SSDDSTPSPT  60
PILSTVERRA DAPPTWWRYR GVRRRRWGKF AAEVRDPTRK RNNNNNNNRV WLGTYETPED  120
AALAYDRAAY KLRGTKALLN FPHLICSNVT DDHYNRVRPK RRLGLNSLDE ISIASTKTST  180
TNEYSPRAKR RNVELINSLA KANLNSHSIM ERFNQLGASC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.12e-23ERF family protein