PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU29553.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 213aa    MW: 24412.1 Da    PI: 9.3841
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU29553.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.43.6e-1868118255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 +ykGVr+++ +g+++AeIrdp     r +r +lg++ t+e+Aa a+++ + +l+g
  PHU29553.1  68 RYKGVRRRP-WGKYAAEIRDPHR---RgARLWLGTYETPEDAALAYDRTAYRLRG 118
                 8********.**********743...24*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MQYLFNDPDF SQILSEIQSP RQYSSIPDHQ NGIFQQNIHQ ENQDSVPISQ ETTKNVTEPT  60
LLDDRPKRYK GVRRRPWGKY AAEIRDPHRR GARLWLGTYE TPEDAALAYD RTAYRLRGTS  120
ALLNFPHLIE SNVTEINRVR PRRRPRTPEI CSRCSSPPPS IGDNNQSNNN NTDGPSSKRR  180
NVALINSLAT ANNLDSQSII MERCLTSNNY LFA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1140146RPRRRPR
2141147PRRRPRT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.14e-33ERF family protein