PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU29559.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 229aa    MW: 25293.1 Da    PI: 8.917
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU29559.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.91.9e-1697146355
         AP2   3 ykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                 y GVr++  +g ++AeIrdp   + k +r +lg++  +e+Aa a+++a+ k++g
  PHU29559.1  97 YIGVRRRQ-WGTFAAEIRDP---NrKGARLWLGTYEKPEDAALAYDQAAFKMRG 146
                 99***887.**********9...6566*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MNPVDDEIFS SDFDLLESIK QHLLSDSDFS DFFSPMSHSN NLDSPNSPSS SLGSTQNSLE  60
EITVLQSPQD PSLESEDRKR GLEVARQEAA PGDWMRYIGV RRRQWGTFAA EIRDPNRKGA  120
RLWLGTYEKP EDAALAYDQA AFKMRGSKAR LNFPHLIGPD MPMLVRVKGS RRAHSSESSS  180
SSSSSSSSSS SSTSSTSSEN GARKRKIDVI NSIAKAKLVR HSLIKLQVL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.15e-34ERF family protein