PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU29560.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 207aa    MW: 23226.8 Da    PI: 8.4708
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU29560.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2538.6e-1783133255
         AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y GVr++  +g + AeIrdp   + + +r +lg++ t+e+Aa a+++a+ k++g
  PHU29560.1  83 RYIGVRRRQ-WGTFSAEIRDP---NrRGARLWLGTYETPEDAALAYDQAAFKIRG 133
                 699***887.**********9...4334*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    
MNIPADDETF SLPDLDSLES IEHLLNDSDF SETISSISSS STLLPNSPSS NSAESPVRPE  60
PTEETKEPVV ARDEENAPQH RRRYIGVRRR QWGTFSAEIR DPNRRGARLW LGTYETPEDA  120
ALAYDQAAFK IRGSKARLNF PELIGSDVRK LARLTVRRRT RSPEPSTSSS ASSENGTRKR  180
KIDVINSIAK AKAKLNCDWN LQTLIQM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.14e-32ERF family protein