PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU29562.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 181aa    MW: 20384.6 Da    PI: 10.4042
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU29562.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.72.6e-1753104155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                 ++y GVr++  +g ++AeIrdp   + k +r +lg++ t+e+Aa a+++a+ k++g
  PHU29562.1  53 TRYIGVRRRQ-WGTFAAEIRDP---NrKGARLWLGTYQTPEDAALAYDQAAFKIRG 104
                 589****887.**********9...6566*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    
MSYSSNNLEL PNSPNSSFGS SPSTRSHEKS ESEEDTNVPT VAAREDKALG DWTRYIGVRR  60
RQWGTFAAEI RDPNRKGARL WLGTYQTPED AALAYDQAAF KIRGSKARLN FPHLIGSNMP  120
EPARLTARRR TRSPEPSDAS STSSENGTRK RKIDVINSIA KAKYFCHSYL KGREFSVQNN  180
W
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.18e-37ERF family protein