PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU29594.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

ERF

Protein Properties

Length: 222aa MW: 25986.4 Da PI: 4.6163

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU29594.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	25.1	4.2e-08	151	185	15	53
AP2 15 WvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkl 53 ++A p++ + ++++g+f taeeAa a+++ + ++ PHU29594.1 151 YLAN---PYS---CtkDQIWIGTFNTAEEAALAYDETAIEI 185 5555...554...2349*******************99887 PP

Sequence ? help Back to Top
Protein Sequence Length: 222 aa Download sequence
MDPLKNLSIP EVLSCMKEKN SIYENDFSLV QRLLMECDRK FKNELENVRE KNKEENRRIE 60 EIYFEIIAEH DEDYNEKFNF LYEIKNEKLE KEVYYEKKLD ELIGILEATG KNDDFNVMQF 120 KTTEECSGKR PGNKGAIIGF PFWKRKICSP YLANPYSCTK DQIWIGTFNT AEEAALAYDE 180 TAIEIKDAEA VTNILKPPPR YHPPTEINYM NPPSSSIDNA RI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46310.1	3e-10	ERF family protein