PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU29595.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 199aa    MW: 22804.6 Da    PI: 10.1526
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU29595.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP246.49.5e-15114164155
         AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 ++ykGVr++k +g+Wv+e r+       + r+++g+f t +eAa a+++  ++++g
  PHU29595.1 114 KKYKGVRQRK-QGKWVVEDRVlG----AKDRIWIGTFNTVKEAALAYDKTINEIKG 164
                 59*******9.9******55522....35*********************999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    
MGKFNFLYER INEIKNEKLE KEAYCEKKLN ELIGKVMAFN GEHGEKEVFR KCSKAIPMKK  60
LNDQIGGNSF ILPRSGVVHF SDCVPMKLTT DEEGKAKPPE ERKRDLKLPQ EKVKKYKGVR  120
QRKQGKWVVE DRVLGAKDRI WIGTFNTVKE AALAYDKTIN EIKGAYAVTN IVKPPPRYPS  180
PMEIKYMSPP SSSIDNARI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78080.13e-16ERF family protein