PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU29596.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 134aa    MW: 15896.2 Da    PI: 10.2362
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU29596.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.91.7e-2067115153
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkl 53 
                 ++y+GVr++k +grWvAeIrd ++   ++r++lg+f+taeeA  a+++a+ ++
  PHU29596.1  67 KKYRGVRQRK-WGRWVAEIRDKRN---NTRYWLGTFDTAEEAVVAYDEAAIEI 115
                 59*******9.**********533...4**********************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 134 aa     Download sequence    
MPHVVRIYMT DNDATDSSTD EEEMLQGEKS QRPKKLWIKE IMIENGRTRV ISKKKSKEKK  60
LLQENMKKYR GVRQRKWGRW VAEIRDKRNN TRYWLGTFDT AEEAVVAYDE AAIEINDANS  120
LKNILEPLLK KINR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.12e-20ERF family protein