PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU29597.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 273aa    MW: 31398.4 Da    PI: 10.3457
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU29597.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.14.6e-18207254253
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkl 53 
                 +y+GVr++k +grW+AeIrd ++n  ++r++lg+ +taeeA  a+++a+ ++
  PHU29597.1 207 KYRGVRQRK-WGRWAAEIRD-KIN--NTRHWLGTLDTAEEAVVAYDEAAIEI 254
                 7*******9.**********.345..4*********************9886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MVIDNRLGMS KFVFGMSQEF NKLTQGSMSV TEYSLKFTKL ARYAPSMMVD SKFVLGVSDS  60
VVKKCQTAIL NKDMYLSRLI VHAHQNKKEK LKEKERENKK ARIAMASNDE HHQNVAVEKP  120
SKIERVEKST EKAGKISVVM LRVVRIYMTD NDATDSSSDE EEMLQGDKSQ RPKKLWIKEI  180
MIENGRTRVI SKNKSKEKKL LHVNMMKYRG VRQRKWGRWA AEIRDKINNT RHWLGTLDTA  240
EEAVVAYDEA AIEINCANGL KNILEPPPKK INP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.19e-22ERF family protein