PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU29600.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 169aa    MW: 19485.2 Da    PI: 10.2289
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU29600.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP269.65.5e-22102152155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 ++y+GVr++k +grWvAeIrd ++   ++r++lg+f+taeeAa a+++a+ +++g
  PHU29600.1 102 KKYRGVRQRK-WGRWVAEIRDKRN---NTRHWLGTFDTAEEAAVAYDEAAIEING 152
                 59*******9.**********533...4***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 169 aa     Download sequence    
MASNDEHHQN VAVEKPSKIE RVENSTKEPG KSSVIMPRVV RIYMTDNDAT DSSSDEEEML  60
QGEKSKRPKK LWIKEIMIEN GRTRVISNKK SKEKKLLQVN MKKYRGVRQR KWGRWVAEIR  120
DKRNNTRHWL GTFDTAEEAA VAYDEAAIEI NGANALTNIL EPPLKKINP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.12e-25ERF family protein