PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU29612.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 168aa    MW: 19123 Da    PI: 6.5471
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU29612.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP237.84.7e-1283133155
         AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 ++ykGVr++k  g+WvAe+ +       +  ++ +++f taee a a+++   +++g
  PHU29612.1  83 KKYKGVRQRK-PGKWVAEVLVlG-----TkDQIGIETFNTAEETALAYDKTVIEMKG 133
                 59*******9.9******77744.....34********************9999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    
MEKLTDQIEG SSCILPRLGV VHYSCFDPMK LSTYEEGKAK GKKLEIHEKA YEEEPIVKNE  60
NSEVISIENS LERDLKMPQE KVKKYKGVRQ RKPGKWVAEV LVLGTKDQIG IETFNTAEET  120
ALAYDKTVIE MKGADVMTKI LKQPPRYTLL TEINYMNPPS SSIDNSRI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.13e-14ERF family protein