PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU29613.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 142aa    MW: 16163.7 Da    PI: 10.55
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU29613.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2378.5e-1257107155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 ++y GVr++k +g+Wv  +r++   g + r+++g+f t ee   a+++  ++++g
  PHU29613.1  57 KKYEGVRQRK-QGKWVPDVRVV---GTKDRIWIGTFSTVEESTLAYDKTINEMKG 107
                 59*******9.9****777774...225************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 142 aa     Download sequence    
MEKLTDQIGG SSSILPRPGV VHFSDCDPIK LTTDEEGKAK PRKKRKRNFK LPQKKVKKYE  60
GVRQRKQGKW VPDVRVVGTK DRIWIGTFST VEESTLAYDK TINEMKGAYA VTNILKPPPR  120
YPSPTEIIYM NPPSSSIYNA RI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14247RKKRKR
24369KKRKRNFKLPQKKVKKYEGVRQRKQGK
34470KKRKRNFKLPQKKVKKYEGVRQRKQGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61630.14e-17ERF family protein