PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU29759.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

MYB

Protein Properties

Length: 335aa MW: 37745.7 Da PI: 9.2394

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU29759.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.9	1.8e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed++l +++++G g+W++ + + g++R++k+c++rw +yl PHU29759.1 14 KGPWTPQEDQKLTYYIEKHGCGSWRALPTKAGLKRCGKSCRLRWINYL 61 79********************************************97 PP
2	Myb_DNA-binding	50.4	5.2e-16	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ +E++ +++++++lG++ W++Ia ++ +Rt++++k++w+++l PHU29759.1 67 RGKFSLQEEQTIIQLHALLGNR-WSAIATHLA-NRTDNEIKNYWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 335 aa Download sequence
MGRSPCCEKV GLKKGPWTPQ EDQKLTYYIE KHGCGSWRAL PTKAGLKRCG KSCRLRWINY 60 LRPDIKRGKF SLQEEQTIIQ LHALLGNRWS AIATHLANRT DNEIKNYWNT HLKKRLTKMG 120 IDPNTHKPRS NFGSANLSHM AQWENARLEA EARLVRESKK QQEEIILINN NINNYNNIHF 180 GTNNLGTKNV LLPLQTKLPS LPCLDVLKAW EGGANWSNRP KIKKEKFFDN FPTSSTSLSN 240 NNLLLMVPSN NNNNNNILGA GLVNTCLVGA GSFLGNNINE ISSYSSYPCL NDIQGFTQLE 300 SVVGSCQDDY DNNDNNYWNT ILNSCTSLAD GSPVF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15310.1	2e-93	MYB family protein