PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU29979.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family CAMTA
Protein Properties Length: 170aa    MW: 20016 Da    PI: 8.5837
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU29979.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-198.26.7e-3171164396
        CG-1   3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 
                 ke  + wl++ ei++i+ n++++  t+ ++ +p+ gsl+Ly+rk v++frk G++w+kkkdgktv ++ +k+  + ++vl+cyYah +en++fq 
  PHU29979.1  71 KEaYHCWLRPPEICDIFRNHQNFYSTQRPPLKPPGGSLFLYDRKLVQHFRKNGHNWRKKKDGKTVDDANQKVE-DDIDVLHCYYAHRKENKNFQE 164
                 454799*************************************************************999875.67*****************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    
MEDVKVDLNN ICLDKEDSML KADAIQCLFF ITDHVKKGLF WGLRKGCRGG DFVRLFLSSH  60
LIGAYFEQIL KEAYHCWLRP PEICDIFRNH QNFYSTQRPP LKPPGGSLFL YDRKLVQHFR  120
KNGHNWRKKK DGKTVDDANQ KVEDDIDVLH CYYAHRKENK NFQEAKLLDA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64220.23e-43CAMTA family protein