PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU29983.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 266aa    MW: 29346.6 Da    PI: 5.8351
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU29983.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.11.4e-2093142255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+G+r++  +g+W+AeIrdp++     r++lg+f taeeAa+a+++a+k+++g
  PHU29983.1  93 KYRGIRQRT-WGKWAAEIRDPRK---GVRVWLGTFNTAEEAARAYDEAAKRIRG 142
                 8*****999.**********954...4************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MCGGAIISDY EPVGNLCRKL STRDLWAELD PISDYWSSSS SSSIAGKPDS ARSSTHSVDK  60
PKKSDSAKSA QLKKGTSLKV EKESSGPRPR KNKYRGIRQR TWGKWAAEIR DPRKGVRVWL  120
GTFNTAEEAA RAYDEAAKRI RGDKAKLNFP PSLSTPSPPA KRQCASTTVP DTPALLESSN  180
IISDNSSLMN FGYPNEAVPY YPMEVAAAAD QDNHHDDYEL KEQISNLESF LELEPADSSQ  240
FSGIVDSDPF NVFLMEDFAA TQQPVY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.18e-41ERF family protein