PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU30178.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family HB-other
Protein Properties Length: 205aa    MW: 22968.8 Da    PI: 10.3143
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU30178.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox38.12.7e-124896351
                --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHH CS
    Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNr 51
                kR ++ +  +++L + F++n+yp+++++++L k+lg+t  qV+ WF N 
  PHU30178.1 48 KRKAYGEVNTKRLYKSFKENNYPDRDAKKKLVKELGITAYQVTKWFENA 96
                789999999***************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    
MASPSSTRVD IKYQRGKQKG NGHTSDSGLS EKLKVGGMST SKSRSSGKRK AYGEVNTKRL  60
YKSFKENNYP DRDAKKKLVK ELGITAYQVT KWFENAHHCQ RHSSRWDIIM SQKVFKESPS  120
SSKMIGESLG TESKRNMNDA SCNGVEKLEL PKRCSNGEKW HEVDMSEGDV LIQNTSRKES  180
GKPAAEVDMK NQGSDVTPCN RTSKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19510.11e-08HB-PHD family protein