PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU30214.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

DBB

Protein Properties

Length: 319aa MW: 35212.5 Da PI: 6.9578

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU30214.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	23.6	1e-07	4	42	5	37
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......H 37 C+ ++++e++ fC+ ++ +C+dC H+ H PHU30214.1 4 QCDVCNKNEASVFCTADEAAICDDCDHRVHHVnklaskH 42 7*************************9997323555555 PP
2	zf-B_box	25.9	2e-08	54	92	2	38
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg..Ht 38 + ++C+ ++e ++ lfC++++ +C++C l +Hk Ht PHU30214.1 54 QGPMCDICQERRAFLFCQQDRAIMCRECDLPIHKAneHT 92 6799*****************************878865 PP

Sequence ? help Back to Top
Protein Sequence Length: 319 aa Download sequence
MKIQCDVCNK NEASVFCTAD EAAICDDCDH RVHHVNKLAS KHQRFSLLQP SPKQGPMCDI 60 CQERRAFLFC QQDRAIMCRE CDLPIHKANE HTQKHNRYLL TGIKLSANST VYTSPSQSQS 120 EISSVNSSVS NLKSQDPISK PVSASVSSTM TNTKAAAVAV VESVKVVKER VGGCNSGHLV 180 NAGGNGLTSS ISEYLEMLPG WHVEDFLDCS TPNGFSKNID DGDLLSFWDT DLESQLSSFP 240 PQNVGIWVPQ VPPPPQSKQE TQTQYFPPSN LNFGGQIGLK ESREVSNIKS SRKWMDDNSF 300 AVPQINPSST SFKRSRTVW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75540.1	2e-75	DBB family protein