PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU30269.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NF-YA
Protein Properties Length: 299aa    MW: 32917.6 Da    PI: 9.7415
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU30269.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA100.81.3e-31145201158
   CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                 +ep+YVNaKQy++Il+RRq Rak+e e+k  +k+rkpylheSRh+hA+rR+RgsgGrF
  PHU30269.1 145 EEPVYVNAKQYHGILRRRQIRAKAELERKA-IKARKPYLHESRHQHAMRRARGSGGRF 201
                 69***************************9.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MPTIAKHDGR QLETGLRITS LSTIQMQPWW QGYGGNTMPL ASENPVAQGK SEGSNKEKET  60
KFLAVESGSD GNSEQYNQNL KNIAPTTAVI MAEQQKELTG HSAMLTPYPY PDMQYGGMMT  120
YGAPVHPHLF EIHHARMPLP LDMEEEPVYV NAKQYHGILR RRQIRAKAEL ERKAIKARKP  180
YLHESRHQHA MRRARGSGGR FLNTKKPNDK DHTPEETQKC GATIPTHSGN SSGSGSSDQG  240
GKKGYTVQDM HNSFSSGNGH GSSVYFAQSA ASEQGNGHYS RGNWSLLVNQ ASQGAASRN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12840.29e-40NF-YA family protein