PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU30408.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 232aa    MW: 27343.4 Da    PI: 7.0726
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU30408.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.30.00033125146930
                 HHHHHHHHHHHHHHHHCTSCCC CS
         HLH   9 ErrRRdriNsafeeLrellPka 30 
                  rrRR+r  s +++L ++lP+ 
  PHU30408.1 125 SRRRRSRPSSEIQKLAKILPTY 146
                 69******************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MKKSFDAFTK YFENKNWILI SGKAAFGQYL DLSEDNNARF HIKMVYDLLK RRFMYENKDK  60
MDEPEVSRNE EFLINIIKGF SIPAGLPWHL VDEVYIPINY GDEFHWVLAV IILKKRHIRV  120
YDSISRRRRS RPSSEIQKLA KILPTYLDIS GFLDQKVHTD WSTIEAYRDK MSNPFYVQYV  180
EGIVQQTIGS LNWGPFVTAY AEYLSDELQV PNDGLDVGLL CERYTVLLWK YG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1114129KKRHIRVYDSISRRRR