PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU30529.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 193aa    MW: 21613.2 Da    PI: 9.0425
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU30529.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.24.5e-11249454
                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                +h ++Er+RR+++N+ +  Lr+l P     + k+ + a+i   ++e+Ik+L
  PHU30529.1  2 SHIAVERNRRRQMNENLKILRSLTPCF---YIKRGDQASIIAGVIEFIKEL 49
                89************************9...9******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
MSHIAVERNR RRQMNENLKI LRSLTPCFYI KRGDQASIIA GVIEFIKELH LVLQSLEAKK  60
RRKSLSPSPG PSTPRPLQLS PTPESTFTIN NNFKELGACC NSPVADVEAK ISGSNVMLRT  120
ISKRIPGQIV KIINVLEKLS FEILHLNIST MQDTVLYSFV IKIGLECQLS VEELAVEVQK  180
SFSSTDVFCI NEV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15963KKRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06120.15e-88bHLH family protein